qPCR SYBR Green Master Mix (ROX Provided Separately)
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qPCR SYBR Green Master Mix (ROX Provided Separately)

Cat.No: RESK-0015 Datasheet

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Product Name qPCR SYBR Green Master Mix (ROX Provided Separately)
Catalog No. RESK-0015
Description This product is a 2× premixed solution for real-time quantitative PCR amplification. The mix contains hot-start DNA polymerase, SYBR Green I, dNTPs, and Mg2+. Only template and primers need to be added to run real-time fluorescent quantitative PCR, greatly simplifying the workflow and reducing the risk of contamination. To accommodate different real-time qPCR instrument models, ROX reference solutions at different concentrations (High ROX/Low ROX) are provided separately for correcting well-to-well fluorescence signal variation. The DNA polymerase ligand used in this product modulates polymerase activity in real time as temperature changes. The formulation includes factors that effectively suppress non-specific PCR amplification and enhance amplification efficiency, enabling excellent linearity over a wide quantitative range.
Intended Use For dye-based (SYBR Green I) real-time fluorescent quantitative PCR. ROX reference dye is provided separately (High ROX/Low ROX), allowing the user to add the appropriate ROX concentration according to the requirements of their specific qPCR instrument.
Principle / Technology SYBR Green I intercalating dye chemistry for real-time fluorescent quantitative PCR, with a hot-start DNA polymerase whose ligand adjusts polymerase activity in response to temperature changes. The formulation contains factors that suppress non-specific amplification and improve amplification efficiency. ROX reference solutions (High ROX/Low ROX) are supplied separately so users can match the ROX level required by their instrument to correct well-to-well fluorescence signal errors.
Detection Method Fluorescent quantitative PCR (SYBR Green dye-based)
Sample Type DNA or cDNA templates. A common input is cDNA reverse-transcribed from 500-1000 ng total RNA, diluted 10-fold, with 1 µL used per qPCR reaction.
Performance Range / Specifications Convenient to use with a simplified workflow: only template and primers need to be added.
Good linearity across a wide quantitative range.
Recommended amplification length: 80-300 bp.
Specificity The formulation contains factors that effectively suppress non-specific PCR amplification.
Reaction Conditions / Protocol Only template and primers need to be added to the 2× premix; add the separately provided ROX reference solution (High ROX or Low ROX) according to the instrument used.
Optimal template input should be determined empirically: dilute the template (generally 5-10 fold) and run a template gradient, selecting the input that gives a Ct value of 20-30.
Recommended cycle number: generally 40; up to 45 for low-abundance targets.
Recommended amplification length: 80-300 bp.
For detailed cycling parameters, refer to the product manual.
Components / Formulation 2× qPCR SYBR Green Master Mix, containing hot-start DNA polymerase, SYBR Green I, dNTPs, and Mg2+
ROX Reference Dye (High ROX), provided separately
ROX Reference Dye (Low ROX), provided separately
Storage Conditions Store at -20°C protected from light. Avoid repeated freeze-thaw cycles. The product contains the fluorescent dye SYBR Green I; avoid exposure to strong light during storage and reaction setup.
Shelf Life 18 months.
Package Specifications 1 mL; 5×1 mL; 50×1 mL; 100×1 mL
Concentration 2×
Shipping Conditions Shipped with ice packs.
Expiration Date / Stability Valid for 18 months when stored at -20°C protected from light. Avoid repeated freeze-thaw cycles and exposure to strong light (the mix contains SYBR Green I).
Compatibility Compatible with the vast majority of real-time qPCR instruments. ROX reference solutions (High ROX/Low ROX) are provided separately, allowing users to add the ROX concentration required by their specific instrument model.
Application Notes / Precautions Determine optimal template input empirically: dilute the template DNA (generally 5-10 fold) and test a gradient, choosing the input that yields a Ct of 20-30. A common input is 1 µL of 10-fold-diluted cDNA reverse-transcribed from 500-1000 ng total RNA.
Criteria for valid qPCR results: (1) standard curve with amplification efficiency of 90-110% (slope -3 to -3.5) and R²>0.98; (2) S-shaped amplification curve with Ct between 15 and 35, and negative control Ct>35 or no Ct; (3) a single peak in the melt curve. Ct values below 15 are not recommended because the fluorescence threshold is set at 10× the standard deviation of cycles 3-15.
ROX is a passive reference dye that normalizes non-PCR-related fluorescence fluctuations and corrects pipetting or well-to-well variation to provide a stable baseline.
Jagged amplification curves at plateau may result from low RNA purity (recommended OD260/OD280 = 1.8-2.0, OD260/OD230 > 2.0) or an uncalibrated instrument; increase template dilution, reprepare high-purity RNA, and calibrate the instrument regularly (generally once a year).
If the amplification curve fails to reach plateau, possible causes include too little template (Ct around 35), too few cycles, or low reagent amplification efficiency; increase template input, raise cycle number (40, or 45 for low-abundance genes), or verify efficiency with a standard curve.
A melt-curve peak with Tm below 80°C usually indicates primer dimers; increase the annealing temperature, raise template input, lower primer concentration, or redesign primers. For miRNA quantification (amplicons of 80-90 bp), peaks at 70-80°C are normal.
Double peaks with both Tm values above 80°C suggest poor primer specificity, cross-contamination, or gDNA contamination; check primers by BLAST, work in a clean bench with fresh tips, and include a no-reverse-transcription control.
A single but non-sharp peak may indicate non-specific products of similar size; a Tm span within 7°C is acceptable, or confirm a single band by high-resolution agarose gel electrophoresis.

For research use only, not for clinical use.

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